Add initial suppressions for pyrefly (#164177)

Adds suppressions to pyrefly will typecheck clean: https://github.com/pytorch/pytorch/issues/163283

Test plan:
`python3 scripts/lintrunner.py`
`pyrefly check`

---

Pyrefly check before: https://gist.github.com/maggiemoss/3a0aa0b6cdda0e449cd5743d5fce2c60
After:

```
 INFO Checking project configured at `/Users/maggiemoss/python_projects/pytorch/pyrefly.toml`
 INFO 0 errors (1,063 ignored)
```

Pull Request resolved: https://github.com/pytorch/pytorch/pull/164177
Approved by: https://github.com/Lucaskabela

torch/nested/_internal/nested_tensor.py

@@ -406,7 +406,7 @@ class ViewBufferFromNested(torch.autograd.Function):
 # Not actually a view!
 class ViewNestedFromBuffer(torch.autograd.Function):
     @staticmethod
-    def forward(
+    def forward(  # pyrefly: ignore  # bad-override
         ctx,
         values: torch.Tensor,
         offsets: torch.Tensor,

torch/nested/_internal/ops.py

@@ -46,11 +46,14 @@ def _outer_to_inner_dim(ndim, dim, ragged_dim, canonicalize=False):
     if canonicalize:
         dim = canonicalize_dims(ndim, dim)
 
-    assert dim >= 0 and dim < ndim
+    assert dim >= 0 and dim < ndim  # pyrefly: ignore  # unsupported-operation
 
     # Map dim=0 (AKA batch dim) -> packed dim i.e. outer ragged dim - 1.
     # For other dims, subtract 1 to convert to inner space.
-    return ragged_dim - 1 if dim == 0 else dim - 1
+    return (
+        # pyrefly: ignore  # unsupported-operation
+        ragged_dim - 1 if dim == 0 else dim - 1
+    )
 
 
 def _wrap_jagged_dim(
@@ -2005,6 +2008,7 @@ def index_put_(func, *args, **kwargs):
     else:
         lengths = inp.lengths()
     torch._assert_async(
+        # pyrefly: ignore  # no-matching-overload
         torch.all(indices[inp._ragged_idx] < lengths),
         "Some indices in the ragged dimension are out of bounds!",
     )