mirror of
https://github.com/biopython/biopython.git
synced 2025-10-20 13:43:47 +08:00
40 lines
884 B
Plaintext
40 lines
884 B
Plaintext
########################################
|
|
# Program: water
|
|
# Rundate: Sat 22 Oct 2022 22:56:03
|
|
# Commandline: water
|
|
# -asequence seqA.fa
|
|
# -bsequence seqB.fa
|
|
# -gapopen 1
|
|
# -gapextend 0.5
|
|
# -sreverse1
|
|
# -outfile water_reverse3.txt
|
|
# Align_format: srspair
|
|
# Report_file: water_reverse3.txt
|
|
########################################
|
|
|
|
#=======================================
|
|
#
|
|
# Aligned_sequences: 2
|
|
# 1: seqA
|
|
# 2: seqB
|
|
# Matrix: EDNAFULL
|
|
# Gap_penalty: 1.0
|
|
# Extend_penalty: 0.5
|
|
#
|
|
# Length: 19
|
|
# Identity: 16/19 (84.2%)
|
|
# Similarity: 16/19 (84.2%)
|
|
# Gaps: 3/19 (15.8%)
|
|
# Score: 77.5
|
|
#
|
|
#
|
|
#=======================================
|
|
|
|
seqA 20 TTTTTTTAAA-CCGGGCCC 3
|
|
||||||| | ||||||||
|
|
seqB 3 TTTTTTT--ACCCGGGCCC 19
|
|
|
|
|
|
#---------------------------------------
|
|
#---------------------------------------
|