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a47460e59a
Note the childs to children changes in Bio/Phylo/Consensus.py included fixing internal variable names only. Not applying all the catergories ==> categories fixes to the (deprecated) EMBOSS wrappers as some would be functional changes. Also no more LaTeX files (for spell checking)
33 lines
1000 B
Python
33 lines
1000 B
Python
# This code is part of the Biopython distribution and governed by its
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# license. Please see the LICENSE file that should have been included
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# as part of this package.
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"""Run BioSQL tests using PostgreSQL."""
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import unittest
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# Really do want "import *" to get all the test classes:
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from common_BioSQL import * # noqa: F403
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from common_BioSQL_online import * # noqa: F403
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# Import these explicitly to avoid flake8 F405 below:
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from common_BioSQL import load_biosql_ini, check_config
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from common_BioSQL_online import share_config
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import requires_internet
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requires_internet.check()
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DBDRIVER = "psycopg2"
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DBTYPE = "pg"
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DBHOST, DBUSER, DBPASSWD, TESTDB = load_biosql_ini(DBTYPE)
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# This will abort if driver not installed etc:
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check_config(DBDRIVER, DBTYPE, DBHOST, DBUSER, DBPASSWD, TESTDB)
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share_config(DBDRIVER, DBTYPE, DBHOST, DBUSER, DBPASSWD, TESTDB)
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if __name__ == "__main__":
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# Run the test cases
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runner = unittest.TextTestRunner(verbosity=2)
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unittest.main(testRunner=runner)
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