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106 lines
2.0 KiB
Plaintext
106 lines
2.0 KiB
Plaintext
#Ignore the build directory (and its sub-directories):
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build
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#Ignore the distribution directory
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dist
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#Ignore backup files from some Unix editors,
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\#*.py\#
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*~
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*.swp
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*.bak
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#Ignore patches and any original files created by patch command
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*.diff
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*.patch
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*.orig
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*.rej
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#Ignore these hidden files from Mac OS X
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.DS_Store
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#Ignore hidden files from Dolphin window manager
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.directory
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#Ignore all compiled python files (e.g. from running the unit tests):
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*.pyc
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*.pyo
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*.py{}
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*.py-e
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#Ignore all Jython class files (present if using Jython)
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*.class
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#Ignore any compiled C code
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*.so
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#Ignore the .tox directory from running tox locally
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.tox/
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#Ignore the MANIFEST file created automatically from MANIFEST.in
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MANIFEST
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#Ignore potential directory created during install:
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biopython.egg-info
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#The graphics unit tests produce output files for human inspection
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#(at the time of writing, only PDF and PNG files are created)
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Tests/Graphics/*.pdf
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Tests/Graphics/*.eps
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Tests/Graphics/*.svg
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Tests/Graphics/*.png
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#Ignore the local BioSQL test settings:
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Tests/biosql.ini
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#TODO - The unit tests shouldn't leave temp files after running:
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Tests/BioSQL/temp_sqlite.db
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Tests/BioSQL/temp_sqlite.db-journal
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Tests/Cluster/cyano_result*
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#TODO - The Tutorial doctests should leave example files after
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#running Tests/test_Tutorial.py
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Doc/examples/other_trees.nwk
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Doc/examples/tree1.nwk
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#Ignore LaTeX temp files, and compiled output
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Doc/*.aux
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Doc/*.log
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Doc/*.out
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Doc/*.toc
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Doc/*.haux
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Doc/*.htoc
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Doc/*/*.aux
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Doc/*/*.log
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Doc/*/*.out
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Doc/*/*.toc
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Doc/*/*.haux
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Doc/*/*.htoc
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Doc/*/*/*.aux
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Doc/*/*/*.log
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Doc/*/*/*.out
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Doc/*/*/*.toc
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Doc/*/*/*.haux
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Doc/*/*/*.htoc
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Doc/Tutorial.txt
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Doc/Tutorial.pdf
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Doc/Tutorial.html
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Doc/biopdb_faq.pdf
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Doc/install/Installation.txt
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Doc/install/Installation.pdf
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Doc/install/Installation.html
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Doc/cookbook/motif/motif.pdf
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Doc/cookbook/motif/motif.html
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#Ignore the hevea.sty file if present (used for HTML docs)
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Doc/hevea.sty
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Doc/*/hevea.sty
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Doc/*/*/hevea.sty
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#Ignore IntelliJ IDEA directory and project files
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.idea
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*.iml
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#Ignore unittest cache dirctory
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.cache/
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