mdehoon 53a65b413e Use C code to parse alignments in which dashes represent gaps (#4737) ...

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* Use int64_t instead of long

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---------

Co-authored-by: Michiel de Hoon <mdehoon@tkx249.genome.gsc.riken.jp>

2024-06-07 23:39:07 +09:00

..

chapter_align.rst

Use C code to parse alignments in which dashes represent gaps (#4737)

2024-06-07 23:39:07 +09:00

chapter_appendix.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_bibliography.rst

Dutch capitalization: De Hoon, or M. de Hoon

2024-01-09 16:47:38 +00:00

chapter_blast.rst

Add a Blast XML2 writer (#4669)

2024-03-17 14:17:06 +09:00

chapter_cluster.rst

Dutch capitalization: De Hoon, or M. de Hoon

2024-01-09 16:47:38 +00:00

chapter_contributing.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_cookbook.rst

Convert remaining latex citations to RST (by hand)

2024-01-04 09:10:45 +00:00

chapter_entrez.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_graphics.rst

PDF to PDN for figures in Sphinx HTML

2024-01-15 16:33:28 +00:00

chapter_introduction.rst

Dutch capitalization: De Hoon, or M. de Hoon

2024-01-09 16:47:38 +00:00

chapter_kegg.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_motifs.rst

Avoid numpy2 scalar repr change in example

2024-04-12 08:25:17 +01:00

chapter_msa.rst

Tweak to doctest examples for numpy2

2024-04-11 14:50:11 +01:00

chapter_pairwise2.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_pairwise.rst

Tweak to doctest examples for numpy2

2024-04-11 14:50:11 +01:00

chapter_pdb.rst

Add a PDBML (PDB XML) parser (#4591)

2024-02-24 15:10:12 -05:00

chapter_phenotype.rst

Fix phenotype example

2024-04-11 13:24:25 +01:00

chapter_phylo.rst

Convert remaining latex citations to RST (by hand)

2024-01-04 09:10:45 +00:00

chapter_popgen.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_quick_start.rst

Remove excess quotes in quick-start chapter

2024-01-04 19:40:14 +00:00

chapter_searchio.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_seq_annot.rst

[Typo] Tutorial - Section 4.3.2.3

2024-05-03 09:08:53 +01:00

chapter_seq_objects.rst

Improve transcription example in tutorial

2024-01-16 20:19:50 +00:00

chapter_seqio.rst

pandoc conversion of Tutorial chapters, LaTeX to RST

2024-01-04 09:10:45 +00:00

chapter_testing.rst

Update docs on how test_Tutorial.py works

2024-01-05 11:52:20 +00:00

chapter_uniprot.rst

Programmatic UniProt search (#4602)

2024-01-31 12:17:06 +09:00

index.rst

Include Tutorial's named authors in RST version

2024-01-09 16:47:38 +00:00