Gert Hulselmans bc0d58b4c4 Add support for reading GAP and WEIGHT parameters from Cluster Buster motif file.

2024-08-12 16:20:55 +01:00

..

abdb.xms

add xms parsing test

2019-05-16 16:02:14 +01:00

alignace.out

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00

Arnt.sites

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00

clusterbuster.pfm

Add support for reading GAP and WEIGHT parameters from Cluster Buster motif file.

2024-08-12 16:20:55 +01:00

clusterbuster.pfm.out

add clusterbuster motif support

2019-05-16 16:02:14 +01:00

fourcolumns.pfm

Add support for reading PFM from Cys2His2 Zinc Finger Proteins PWM Predictor. (#4693)

2024-06-30 09:52:02 +09:00

fourrows.pfm

Add support for reading PFM from Cys2His2 Zinc Finger Proteins PWM Predictor. (#4693)

2024-06-30 09:52:02 +09:00

MA0056.1.transfac

In the TRANSFAC parser, don't issue warnings if strict is False (#1892)

2019-02-03 04:37:25 +09:00

mast.adh.de.oops.html.txt

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

mast.adh.de.oops.html.xml

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

mast.crp0.de.oops.txt.txt

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

mast.crp0.de.oops.txt.xml

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

mast.Klf1-200.cd.oops.xml.txt

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

mast.Klf1-200.cd.oops.xml.xml

Use XML parsing for MAST output files (#2082)

2019-06-03 11:43:39 +01:00

meme.adh.classic.oops.xml

Use XML parsing for MEME output files (#2354)

2020-04-01 09:12:28 +09:00

meme.farntrans5.classic.anr.xml

Use XML parsing for MEME output files (#2354)

2020-04-01 09:12:28 +09:00

meme.INO_up800.classic.oops.xml

Use XML parsing for MEME output files (#2354)

2020-04-01 09:12:28 +09:00

meme.out

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00

meme.psp_test.classic.zoops.xml

Use XML parsing for MEME output files (#2354)

2020-04-01 09:12:28 +09:00

minimal_test_rna.meme

Improve minimal meme format parsing (#4787)

2024-08-09 23:20:35 +09:00

minimal_test.meme

Improve minimal meme format parsing (#4787)

2024-08-09 23:20:35 +09:00

REB1.pfm

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00

SRF.pfm

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00

transfac.dat

Renaming Bio.Motif to Bio.motifs; Copying the biopython 1.60 version of Bio.Motif back to Bio.Motif.

2013-01-22 19:13:05 +09:00