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108 lines
3.6 KiB
Plaintext
108 lines
3.6 KiB
Plaintext
BLASTP 2.0.10 [Aug-26-1999]
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Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
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Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
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"Gapped BLAST and PSI-BLAST: a new generation of protein database search
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programs", Nucleic Acids Res. 25:3389-3402.
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Query= gi|120291|sp|P21297|FLBT_CAUCR FLBT PROTEIN
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(141 letters)
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Database: data/swissprot
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82,258 sequences; 29,652,561 total letters
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Searching..................................................done
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Score E
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Sequences producing significant alignments: (bits) Value
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gi|120291|sp|P21297|FLBT_CAUCR FLBT PROTEIN 284 7e-77
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gi|3024946|sp|Q58368|Y958_METJA HYPOTHETICAL PROTEIN MJ0958 PRE... 29 3.4
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gi|3024745|sp|O26320|THSA_METTH PROBABLE THERMOSOME SUBUNIT A 29 4.5
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>gi|120291|sp|P21297|FLBT_CAUCR FLBT PROTEIN
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Length = 141
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Score = 284 bits (718), Expect = 7e-77
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Identities = 141/141 (100%), Positives = 141/141 (100%)
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Query: 1 MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTPARHIYFPV 60
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MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTPARHIYFPV
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Sbjct: 1 MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTPARHIYFPV 60
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Query: 61 MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKALMLSRKLI 120
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MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKALMLSRKLI
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Sbjct: 61 MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKALMLSRKLI 120
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Query: 121 EYEDERLGHVSSGVSAGGDAG 141
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EYEDERLGHVSSGVSAGGDAG
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Sbjct: 121 EYEDERLGHVSSGVSAGGDAG 141
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>gi|3024946|sp|Q58368|Y958_METJA HYPOTHETICAL PROTEIN MJ0958
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PRECURSOR
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Length = 426
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Score = 29.3 bits (64), Expect = 3.4
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Identities = 15/47 (31%), Positives = 23/47 (48%)
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Query: 28 VLVLQNKASVLREKDIMQPDQVTTPARHIYFPVMMMYLDEVGAEKFY 74
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+LVL N ++ K D TT +IY P+ + + A+KFY
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Sbjct: 169 ILVLINNTNITELKKFEDDDYYTTFQHYIYQPIFIFTTYDSKAKKFY 215
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>gi|3024745|sp|O26320|THSA_METTH PROBABLE THERMOSOME SUBUNIT A
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Length = 542
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Score = 29.0 bits (63), Expect = 4.5
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Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
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Query: 34 KASVLREKDIMQPDQVTTPARHIYFPVMMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVV 93
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+A V+ EK I D+V T P + + + EE L + +GVV +
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Sbjct: 339 EAGVIYEKKIF--DEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVAS--T 394
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Query: 94 LQDCIAISKHVMAREYYKALMLSRKLIEYEDERLGHVSSGVSAGGDA 140
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L+D + V+A + ++RKL EY D G VSA DA
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Sbjct: 395 LED-----REVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADA 436
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Database: data/swissprot
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Posted date: Nov 15, 1999 2:55 PM
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Number of letters in database: 29,652,561
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Number of sequences in database: 82,258
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Lambda K H
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0.321 0.138 0.390
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Gapped
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Lambda K H
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0.270 0.0470 0.230
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Matrix: BLOSUM62
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Gap Penalties: Existence: 11, Extension: 1
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Number of Hits to DB: 7927717
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Number of Sequences: 82258
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Number of extensions: 284596
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Number of successful extensions: 567
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Number of sequences better than 10.0: 3
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Number of HSP's better than 10.0 without gapping: 2
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Number of HSP's successfully gapped in prelim test: 1
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Number of HSP's that attempted gapping in prelim test: 565
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Number of HSP's gapped (non-prelim): 3
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length of query: 141
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length of database: 29,652,561
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effective HSP length: 50
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effective length of query: 91
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effective length of database: 25,539,661
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effective search space: 2324109151
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effective search space used: 2324109151
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T: 11
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A: 40
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X1: 16 ( 7.4 bits)
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X2: 38 (14.8 bits)
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X3: 64 (24.9 bits)
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S1: 41 (21.8 bits)
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S2: 61 (28.2 bits)
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