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183ec6448a
Fix use of deprecated and removed .get_columns method in Bio/PDB/StructureAlignment.py and move its self-test into test_PDB.py Squashed commit of #1147, as part of addressing #820.
5 lines
1.2 KiB
Plaintext
5 lines
1.2 KiB
Plaintext
>2xhe_chainA_p002
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HMSLKSAVKTVLTNSLRSVADGGDWKVLVVDKPALRMISECARMSEILDLGVTVVEDVSKQRKVLPQFHGVYFIEPTEENLDYVIRDFADRTPTYEAAHLFFLSPVPDALMAKLASAKAVKYVKTLKEINTLFIPKEHRVFTLNEPHGLVQYYGSRSSSYNIDHLVRRLSTLCTTMNVAPIVRYSSTSTPGTERMAMQLQKEIDMSVSQGLINAREGKLKSQFLILDRAVDLKSPLVHELTYQAAAYDLLNIENDIYSYSTVDAGGREQQRQVVLGEDDDIWLQMRHLHISEVF-RKVK-SSFDEFCVSARRLQGLRD--SQQG-EGG-AGALKQMLKDLPQHREQMQKYSLHLDMSNAINMAFSSTIDSCTKAEQNIVTEEEQDGNKVRDFIGEVASVVVDRRVSTEDKLRCLMLCVLAKNGTSSHELNNLLDNANIATPSRSAIYNLEMLGATVVADRRGRKPKTMKRIERDMPYVLSRWTPIVKDLMEYIATGQLDLESYPAVRDGPSVVQPKESAKPKLFVFINGTVSYNEIRCAYEVSQSSGYEVYIGAHNIATPAEFVELVSLLDK
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>1a8o_chainA_p001
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------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDIRQGPK---------EPFRDYVDRF-------------------------------YKTLRAEQASQEVKNWM-TETLLVQN--AN-P-DCKTILKA-LGPGATLEEMMTACQ---G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
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