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biopython/Tests/Mauve/simple_short.xmfa
Markus.Piotrowski@ruhr-uni-bochum.de 09e9cc9b13 Fix doctest for Bio.AlignIO.MauveIO
2019-04-30 15:32:11 +01:00

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#FormatVersion Mauve1
#Sequence1File a.fa
#Sequence1Entry 1
#Sequence1Format FastA
#Sequence2File b.fa
#Sequence2Entry 2
#Sequence2Format FastA
#Sequence3File c.fa
#Sequence3Entry 3
#Sequence3Format FastA
#BackboneFile three.xmfa.bbcols
> 1:0-0 + a.fa
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
> 2:5417-5968 + b.fa
TTTAAACATCCCTCGGCCCGTCGCCCTTTTATAATAGCAGTACGTGAGAGGAGCGCCCTAAGCTTTGGGAAATTCAAGC-
--------------------------------------------------------------------------------
CTGGAACGTACTTGCTGGTTTCGCTACTATTTCAAACAAGTTAGAGGCCGTTACCTCGGGCGAACGTATAAACCATTCTG
> 3:9476-10076 - c.fa
TTTAAACACCTTTTTGGATG--GCCCAGTTCGTTCAGTTGTG-GGGAGGAGATCGCCCCAAACGTATGGTGAGTCGGGCG
TTTCCTATAGCTATAGGACCAATCCACTTACCATACGCCCGGCGTCGCCCAGTCCGGTTCGGTACCCTCCATGACCCACG
---------------------------------------------------------AAATGAGGGCCCAGGGTATGCTT
=
> 2:5969-6015 + b.fa
-----------------------
GGGCGAACGTATAAACCATTCTG
> 3:9429-9476 - c.fa
TTCGGTACCCTCCATGACCCACG
AAATGAGGGCCCAGGGTATGCTT