mdehoon b7f93206df Bigmaf writer (#4324) ...

* update

* update

* update

* update

* update

* update

* update

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Co-authored-by: Michiel de Hoon <mdehoon@tkx249.genome.gsc.riken.jp>

2023-06-07 22:10:42 +09:00

..

bigMaf.as

Bigmaf writer (#4324)

2023-06-07 22:10:42 +09:00

bug2453.maf

Restored bug2453.maf and renamed modified 'track' line test copy

2017-02-13 18:02:34 +00:00

bundle_without_target.bb

bigMaf parser (#4060)

2022-08-29 09:21:34 +09:00

bundle_without_target.maf

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

cnksr3.fa

Minor changes related to unit tests

2017-02-13 18:02:34 +00:00

corrupt.idx

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

humor.maf

Adding humor.maf test file from BioPerl

2017-02-13 18:02:34 +00:00

invalid.idx

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

length_coords_mismatch.maf

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

ucsc_mm9_chr10_bad.maf

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

ucsc_mm9_chr10_bad.mafindex

MAFINDEX_VERSION = 2 (inclusive end coordinates)

2018-04-10 10:35:45 +01:00

ucsc_mm9_chr10_big.maf

Minor changes related to unit tests

2017-02-13 18:02:34 +00:00

ucsc_mm9_chr10_big.mafindex

MAFINDEX_VERSION = 2 (inclusive end coordinates)

2018-04-10 10:35:45 +01:00

ucsc_mm9_chr10.bb

bigMaf parser (#4060)

2022-08-29 09:21:34 +09:00

ucsc_mm9_chr10.maf

Added a real snippet of mm9 chr10 from UCSC to MAF test files

2017-02-13 18:02:34 +00:00

ucsc_mm9_chr10.mafindex

MAFINDEX_VERSION = 2 (inclusive end coordinates)

2018-04-10 10:35:45 +01:00

ucsc_test.bb

bigMaf parser (#4060)

2022-08-29 09:21:34 +09:00

ucsc_test.maf

Restored bug2453.maf and renamed modified 'track' line test copy

2017-02-13 18:02:34 +00:00

unfinished.idx

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00

wrong_version.idx

MafIO.MafIndex unit tests

2017-02-13 18:02:34 +00:00