mdehoon 77bf915518 Bio.Align parser/writer for A2M alignment files (#3966) ...

* test files

* test script

* add module

* add state column annotation

* update

2022-06-30 23:29:58 +09:00

..

clustalw.a2m

Bio.Align parser/writer for A2M alignment files (#3966)

2022-06-30 23:29:58 +09:00

clustalw.aln

Generalize PairwiseAlignment to include multiple alignments (#3624)

2021-07-05 22:59:17 +09:00

clustalw.fa

Parser for aligned FASTA (#3962)

2022-06-22 13:55:00 +09:00

hedgehog.aln

Adding a Clustal W 2.0 alignment

2008-07-08 09:40:09 +00:00

kalign.a2m

Bio.Align parser/writer for A2M alignment files (#3966)

2022-06-30 23:29:58 +09:00

kalign.aln

Generalize PairwiseAlignment to include multiple alignments (#3624)

2021-07-05 22:59:17 +09:00

kalign.fa

Parser for aligned FASTA (#3962)

2022-06-22 13:55:00 +09:00

msaprobs.a2m

Bio.Align parser/writer for A2M alignment files (#3966)

2022-06-30 23:29:58 +09:00

msaprobs.aln

Generalize PairwiseAlignment to include multiple alignments (#3624)

2021-07-05 22:59:17 +09:00

msaprobs.fa

Parser for aligned FASTA (#3962)

2022-06-22 13:55:00 +09:00

muscle.a2m

Bio.Align parser/writer for A2M alignment files (#3966)

2022-06-30 23:29:58 +09:00

muscle.aln

Generalize PairwiseAlignment to include multiple alignments (#3624)

2021-07-05 22:59:17 +09:00

muscle.fa

Parser for aligned FASTA (#3962)

2022-06-22 13:55:00 +09:00

odd_consensus.aln

Added a new example alignment from clustalw where the first line of the consensus is blank

2008-07-08 15:54:47 +00:00

opuntia.aln

30 Sept 00 Brad

2000-09-30 15:12:11 +00:00

probcons.a2m

Bio.Align parser/writer for A2M alignment files (#3966)

2022-06-30 23:29:58 +09:00

probcons.aln

Generalize PairwiseAlignment to include multiple alignments (#3624)

2021-07-05 22:59:17 +09:00

probcons.fa

Parser for aligned FASTA (#3962)

2022-06-22 13:55:00 +09:00

promals3d.aln

Fixing Bio.Clustalw when parsing non-standard header lines, and adding a test case from PROMALS3D (Bug 2564)

2008-08-07 12:21:29 +00:00

protein.aln

Adding the protein.aln file used in the Tutorial to the Bio.AlignIO unit test

2008-08-05 20:59:24 +00:00