26 Commits

Author	SHA1	Message	Date
ruff-isort	de0bb21fb3	Apply isort (forcing single lines, not sorting by type) via ruff ... $ ruff check --fix --select=I \ --config=lint.isort.force-single-line=true \ --config=lint.isort.order-by-type=false \ BioSQL/ Bio/ Tests/ Scripts/ Doc/ setup.py Using ruff version 0.4.10	2024-06-26 15:31:39 +09:00
Peter Cock	6d32719692	f-strings with flynt v0.69 on Bio/Graphics/	2021-10-08 12:24:25 +01:00
black	ae2c97bc67	black, version 19.10b0, on Bio.Graphics	2020-01-24 11:30:13 +00:00
mdehoon	a477dd90da	updates Bio.Graphics for pyton3 (#2560) ... * updates Bio.Graphics for pyton3 * update tests * need to check hasattr * typo	2020-01-24 18:58:25 +09:00
black	3d5a84c891	ran black, version 19.10b, on Bio/Graphics/	2019-12-04 09:50:29 -05:00
unify	b58c4b613b	Using tool unify to convert Bio/ to use double quotes ... Using https://github.com/myint/unify for this: $ unify --quote \" --in-place Bio/*.py Bio/*/*.py Bio/*/*/*.py $ git checkout Bio/Restriction/Restriction_Dictionary.py Note excluded automatically generated file Bio/Restriction/Restriction_Dictionary.py	2019-08-02 14:10:22 +01:00
peterjc	3f3bf7bc59	Clarify copyright + dual license Bio/Graphics/*.py ... The named copyright holders and other contributors according to the git log have all agreed to the dual licensing, see GitHub issue #898. - Brad Chapman (@chapmanb) - Brian Osborne (@bosborne) - Carlos Peña (@carlosp420) - Christian Brueffer (@cbrueffer) - Connor McCoy (@cmccoy) - Jeroen Van Goey (@BioGeek) - Leighton Pritchard (@widdowquinn) - Michiel de Hoon (@mdehoon) - Peter Cock (@peterjc) - Suresh Panneerselvam (@Amrithasuresh) - Travis Wrightsman (@twrightsman) - @morrme	2018-04-19 16:59:56 +01:00
Peter Cock	67857bbf26	docstring work for Bio.Graphics ... Making both pydocstyle and RST validator happy.	2017-06-16 15:25:12 +01:00
peterjc	b894a50c69	PEP E124 closing bracket does not match visual indentation ... Lots of white space changes, some docstring tweaking and long line fixing too.	2016-06-13 15:46:31 +01:00
peterjc	1119425f45	PEP8 E402 module level imports vs __docformat__ placement ... This was mostly due to the latest version of the pep8 tool being stricter and wanting the __docformat__ line after the module level imports. Rather than moving them all, I removed them - and we'll switch to using reStructuredText as the default when converting the docstrings into API HTML pages for the website. This commit also includes assorted other PEP8 fixes which our recommend git pre-commit hook spotted, and I fixed by hand.	2016-05-10 17:13:46 +01:00
Peter Cock	c62c9a4cf1	PEP8 white space ... autopep8 --select E225,E226,E261,E302 -i Bio/Graphics/*.py	2015-01-04 04:08:39 +00:00
Travis Wrightsman	1e47cee152	explicit docformat definitions	2014-11-11 17:06:07 +09:00
Travis Wrightsman	9c81e9815a	restructured text progress 2	2014-11-11 17:04:56 +09:00
carlosp420	94f99be8f1	PEP8 fixes FSSP, GA, GenBank, Geo, Graphics	2014-11-02 18:51:07 +00:00
peterjc	d18aab81d5	autopep8 E261 - Fix spacing after comment hash ... $ autopep8 --version autopep8 1.0.4 $ autopep8 -r -i --select E261 ...	2014-10-27 14:25:37 +00:00
peterjc	14977ce666	Apply 2to3 ws_comma fixer (white space changes) ... $ 2to3 --no-diffs -n -w -f ws_comma Bio BioSQL Tests Doc Scripts	2013-10-05 13:59:54 +01:00
peterjc	764c5ed3cf	Update URL for ReportLab in MissingPythonDependencyError	2013-03-19 15:27:51 +00:00
Christian Brueffer	a7db23aa4b	Add blank lines where needed (PEP8 E302).	2012-12-05 19:56:01 +08:00
Christian Brueffer	9dfec35649	Zap redundant backslashes between brackets (PEP8 E502).	2012-12-05 10:14:03 +00:00
Christian Brueffer	97d91e2629	Fix typos.	2012-11-26 16:33:32 +08:00
Christian Brueffer	a594cd8a63	Fix a common typo.	2012-11-16 14:29:32 +00:00
peterjc	cb1f54499c	Use ImportError subclass for missing Python dependencies (see Gentoo Bug 313125 with pydoc)	2010-10-18 14:40:43 +01:00
Peter	f35efefe5e	No code changes. Removing white space before ':' character to match PEP8 style guide.	2009-11-11 12:25:21 +00:00
peterc	7c3834cd10	Standardise how we invoke the different ReportLab renderers, and offer all the formats in all the modules. See Bug 2718	2009-03-20 15:46:35 +00:00
mdehoon	d56188a0e3	Check for ReportLab only when it actually used. No need to check it at ... compile time.	2008-05-14 05:36:22 +00:00
chapmanb	fc907175e0	Whew, final thing to add! Added code for displaying pretty pictures using reportlab.	2001-12-14 15:38:11 +00:00