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https://github.com/biopython/biopython.git
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Drop CodeCov from CI (wasn't working) (#4723)
Currently this sometimes causes a CI failure, and isn't doing anything useful due to changes on the CodeCov side. Closes #3752.
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@ -46,7 +46,3 @@ test_script:
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- coverage run run_tests.py --offline
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- coverage xml
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- cd ..
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after_test:
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- conda install -c conda-forge codecov
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- codecov --file Tests/coverage.xml -X pycov -X gcov
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@ -1,7 +0,0 @@
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# See https://github.com/codecov/support/wiki/Codecov-Yaml
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# and https://codecov.io/gh/biopython/biopython which is
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# updated via our TravisCI and AppVeyor testing.
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coverage:
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ignore:
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- "Tests/*"
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6
.github/workflows/ci.yml
vendored
6
.github/workflows/ci.yml
vendored
@ -201,12 +201,10 @@ jobs:
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run: |
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python -m pip install .
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- name: Run test suite and get coverage
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- name: Run test suite
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run: |
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cd Tests
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rm -rf coverage.xml
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coverage run run_tests.py --offline
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coverage xml
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python run_tests.py --offline
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shell: bash
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test_macos:
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@ -97,11 +97,9 @@ optional dependencies included), plus also style checks using ``pre-commit``
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**The continuous integration checks must pass before your pull request will be
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merged.**
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The continuous integration tests collect test coverage information via
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CodeCov: https://codecov.io/github/biopython/biopython/
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Ideally the CodeCov checks will also pass, but we currently do not insist on
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this when reviewing pull requests.
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We have previously used CodeCov to track test coverage information, and would
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like to restore this - but historically did not insist their test coverage
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checks passed when reviewing pull requests.
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Contributing to the Biopython Tutorial
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--------------------------------------
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@ -16,9 +16,6 @@
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.. image:: https://img.shields.io/github/actions/workflow/status/biopython/biopython/ci.yml?logo=github-actions
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:alt: GitHub workflow status
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:target: https://github.com/biopython/biopython/actions
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.. image:: https://img.shields.io/codecov/c/github/biopython/biopython/master.svg?logo=codecov
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:alt: Test coverage on CodeCov
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:target: https://codecov.io/github/biopython/biopython/
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.. image:: http://depsy.org/api/package/pypi/biopython/badge.svg
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:alt: Research software impact on Depsy
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:target: http://depsy.org/package/python/biopython
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