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Fixed flake8 rule D209 violations

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D209 Multi-line docstring closing quotes should be on a separate line
This commit is contained in:
Franziska Arndt
2020-01-04 01:45:14 +01:00
committed by Peter Cock
parent b86d003e49
commit 392ede471d
2 changed files with 8 additions and 4 deletions
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6
Bio/Phylo/PAML/baseml.py
View File

@ -104,7 +104,8 @@ class Baseml(Paml):
Check that the file exists and that the lines in the file are valid.
Then update each BASEML options to the new option if supplied or None
if not supplied. Otherwise raise an exception."""
if not supplied. Otherwise raise an exception.
"""
temp_options = {}
if not os.path.isfile(ctl_file):
raise FileNotFoundError(f"File not found: {ctl_file!r}")
@ -192,7 +193,8 @@ def read(results_file):
Check that the file exits, that the results file is not empty, and then
parse the file. Check there is a version in the results and then return
the results. Otherwise raise an exception."""
the results. Otherwise raise an exception.
"""
results = {}
if not os.path.exists(results_file):
raise FileNotFoundError("Results file does not exist.")

6
Bio/Phylo/PAML/codeml.py
View File

@ -102,7 +102,8 @@ class Codeml(Paml):
Check that the file exists and that the lines in the file are valid.
Then update each CODEML options to the new option if supplied or None
if not supplied. Otherwise raise an exception."""
if not supplied. Otherwise raise an exception.
"""
temp_options = {}
if not os.path.isfile(ctl_file):
raise FileNotFoundError(f"File not found: {ctl_file!r}")
@ -202,7 +203,8 @@ def read(results_file):
"""Parse a CODEML results file.
Check that the file exists and is not empty. Return the results
if there are any. Otherwise raise an exception."""
if there are any. Otherwise raise an exception.
"""
results = {}
if not os.path.exists(results_file):
raise FileNotFoundError("Results file does not exist.")