frozenleaves/biopython
1
0
Fork 0
mirror of https://github.com/biopython/biopython.git synced 2025-10-20 13:43:47 +08:00
Code Issues Packages Projects Releases Wiki Activity

Standardizing on import numpy as np

Browse Source
This commit is contained in:
John Stilley
2024-08-30 07:13:36 -07:00
committed by Peter Cock
parent 7ba26eb1a3
commit 2907bcbd82
22 changed files with 124 additions and 124 deletions
Download Patch File Download Diff File Expand all files Collapse all files

4
Doc/Tutorial/chapter_align.rst
View File

@ -4704,11 +4704,11 @@ matches to any unknown nucleotides separately.
.. code:: pycon
>>> import numpy
>>> import numpy as np
>>> from Bio import Align
>>> query = "GGTGGGGG"
>>> target = "AAAAAAAggggGGNGAAAAA"
>>> coordinates = numpy.array([[0, 7, 15, 20], [0, 0, 8, 8]])
>>> coordinates = np.array([[0, 7, 15, 20], [0, 0, 8, 8]])
>>> alignment = Align.Alignment([target, query], coordinates)
>>> print(alignment)
target 0 AAAAAAAggggGGNGAAAAA 20