frozenleaves/biopython
1
0
Fork 0
mirror of https://github.com/biopython/biopython.git synced 2025-10-20 13:43:47 +08:00
Code Issues Packages Projects Releases Wiki Activity

Adding an SFF file created with Roche tools using the .srt1.00 style index (with no XML manifest)

Browse Source
This commit is contained in:
Peter
2009-10-27 13:31:26 +00:00
parent 6896cd30fd
commit 11d09f7cf9
2 changed files with 8 additions and 1 deletions
Download Patch File Download Diff File Expand all files Collapse all files

BIN
Tests/Roche/E3MFGYR02_no_manifest.sff Normal file
View File

Binary file not shown.

9
Tests/Roche/README.txt
View File

@ -5,8 +5,15 @@ Created with Roche tools from E3MFGYR02.sff, just 10 random reads:
* E3MFGYR02_random_10_reads.qual
* E3MFGYR02_random_10_reads_no_trim.fasta
* E3MFGYR02_random_10_reads_no_trim.qual
* E3MFGYR02_no_manifest.sff - has an .srt.00 style index and no manifest
Modified to move the index block (as allowed in the SFF spec):
Modified with a dummy index block in various positions:
* E3MFGYR02_alt_index_at_start.sff
* E3MFGYR02_alt_index_in_middle.sff
* E3MFGYR02_alt_index_at_end.sff
Modified to move the ".mft1.00" index block:
* E3MFGYR02_index_at_start.sff
* E3MFGYR02_index_in_middle.sff