# STOCKHOLM 1.0
#=GF ID   7kD_DNA_binding
#=GF AC   PF02294.20
#=GF DE   7kD DNA-binding domain
#=GF AU   Mian N;0000-0003-4284-4749
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_8148 (release 5.2)
#=GF GA   25.00 25.00;
#=GF TC   26.60 46.20;
#=GF NC   23.20 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0049
#=GF RN   [1]
#=GF RM   3130377
#=GF RT   Microsequence analysis of DNA-binding proteins 7a, 7b, and 7e
#=GF RT   from the archaebacterium Sulfolobus acidocaldarius. 
#=GF RA   Choli T, Wittmann-Liebold B, Reinhardt R; 
#=GF RL   J Biol Chem 1988;263:7087-7093.
#=GF DR   INTERPRO; IPR003212;
#=GF DR   SCOP; 1sso; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This family contains members of the hyper-thermophilic
#=GF CC   archaebacterium  7kD DNA-binding/endoribonuclease P2 family.
#=GF CC   There are five 7kD DNA-binding proteins, 7a-7e, found as
#=GF CC   monomers in the cell. Protein 7e shows the  tightest DNA-binding
#=GF CC   ability.
#=GF SQ   3
#=GS DN7_METS5/4-61   AC A4YEA2.1
#=GS DN7A_SACS2/3-61  AC P61991.2
#=GS DN7A_SACS2/3-61  DR PDB; 1SSO A; 2-60;
#=GS DN7A_SACS2/3-61  DR PDB; 1JIC A; 2-60;
#=GS DN7A_SACS2/3-61  DR PDB; 2CVR A; 2-60;
#=GS DN7A_SACS2/3-61  DR PDB; 1B4O A; 2-60;
#=GS DN7E_SULAC/3-60  AC P13125.2
DN7_METS5/4-61              KIKFKYKGQDLEVDISKVKKVWKVGKMVSFTYDD.NGKTGRGAVSEKDAPKELLNMIGK
DN7A_SACS2/3-61             TVKFKYKGEEKQVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEK
#=GR DN7A_SACS2/3-61  SS    EEEEESSSSEEEEETTTEEEEEESSSSEEEEEE-SSSSEEEEEEETTTS-CHHHHHHTT
DN7E_SULAC/3-60             KVRFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDD.NGKTGRGAVSEKDAPKELMDMLAR
#=GC SS_cons                EEEEESSSSEEEEETTTEEEEEESSSSEEEEEE-SSSSEEEEEEETTTS-CHHHHHHTT
#=GC seq_cons               KVKFKYKGEEKEVDISKIKKVWRVGKMVSFTYDD.NGKTGRGAVSEKDAPKELLsMLuK
//
