MUSCLE (3.8) multiple sequence alignment


Test1seq             ------------------------------------------------------------
AT3G20900.1-SEQ      ATGAACAAAGTAGCGAGGAAGAACAAAACATCAGGTGAACAAAAAAAAAACTCAATCCAC
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             -----AGTTACAATAACTGACGAAGCTAAGTAGGCTACTAATTAACGTCATCAACCTAAT
AT3G20900.1-SEQ      ATCAAAGTTACAATAACTGACGAAGCTAAGTAGGCTAGAAATTAAAGTCATCAACCTAAT
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             ACATAGCACTTAGAAAAAAGTGAAGTAAGAAAATATAAAATAATAAAAGGGTGGGTTATC
AT3G20900.1-SEQ      ACATAGCACTTAGAAAAAAGTGAAGCAAGAAAATATAAAATAATAAAAGGGTGGGTTATC
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             AATTGATAGTGTAAATCATCGTATTCCGGTGATATACCCTACCACAAAAACTCAAACCGA
AT3G20900.1-SEQ      AATTGATAGTGTAAATCATAGTTGATTTTTGATATACCCTACCACAAAAACTCAAACCGA
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             CTTGATTCAAATCATCTCAATAAATTAGCGCCAAAATAATGAAAAAAATAATAACAAACA
AT3G20900.1-SEQ      CTTGATTCAAATCATCTCAAAAAACAAGCGCCAAAATAATGAAAAAAATAATAACAAAAA
AT3G20900.1-CDS      --------------------------------------ATGAACAAAGTAGCGAGGAAGA
                                                           ***** *** **   *  ** *

Test1seq             AAAACAAACCAAAATAAGAAAAAACATTACGCAAAACATAATAATTTACTCTTCGTTATT
AT3G20900.1-SEQ      CAAACAAACCAAAATAAGAAAAAACATTACGCAAAACATAATAATTTACTCTTCGTTATT
AT3G20900.1-CDS      A------------------------------CAAAACATC--------------------
                                                    ********                     

Test1seq             GTATTAACAAATCAAAGAGCTGAATTTTGATCACCTGCTAATACTACTTTCTGTATTGAT
AT3G20900.1-SEQ      GTATTAACAAATCAAAGAGATGAATTTTGATCACCTGCTAATACTACTTTCTGTATTGAT
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             CCTATATCAACGTAAACAAAGATACTAATAATTAACTAAAAGTACGTTCATCGATCGTGT
AT3G20900.1-SEQ      CCTATATCAAAAAAAAAAAAGATACTAATAATTAACTAAAAGTACGTTCATCGATCGTGT
AT3G20900.1-CDS      ------------------------------------------------------------
                                                                                 

Test1seq             TCGTTGACGAAGAAGAGCTCTATCTCCGGCGGAGCAAAGAAAACGATCTGTCTCCGTCGT
AT3G20900.1-SEQ      GCGTTGACGAAGAAGAGCTCTATCTCCGGCGGAGCAAAGAAAACGATCTGTCTCCGTCGT
AT3G20900.1-CDS      --------------------------------AGCAAAGAAAACGATCTGTCTCCGTCGT
                                                     ****************************

Test1seq             AACACACGGTCGCTAGAGAAACTTTGCTTCTTCGGCGCCGGTGGACACGTCAGCATCTCC
AT3G20900.1-SEQ      AACACACAGTTTTTCGAGACCCTTTGCTTCTTCGGCGCCGGTGGACACGTCAGCATCTCC
AT3G20900.1-CDS      AACACACAGTTTTTCGAGACCCTTTGCTTCTTCGGCGCCGGTGGACACGTCAGCATCTCC
                     ******* **   * ****  ***************************************

Test1seq             GGTATCCTAGACTTCTTGGCTTTCGGGGTACAACAACCGCGTGGTGACGTCAGCACCGCT
AT3G20900.1-SEQ      GGTATCCTAGACTTCTTGGCTTTCGGGGTACAACAACCGCCTGGTGACGTCAGCACCGCT
AT3G20900.1-CDS      GGTATCCTAGACTTCTTGGCTTTCGGGGTACAACAACCGCCTGGTGACGTCAGCACCGCT
                     **************************************** *******************

Test1seq             GCTGGGGATGGAGAGGGAACAGAGTT-
AT3G20900.1-SEQ      GCTGGGGATGGAGAGGGAACAGAGTAG
AT3G20900.1-CDS      GCTGGGGATGGAGAGGGAACAGAGTAG
                     *************************  
