BLASTP 2.0.11 [Jan-20-2000]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING
PROTEIN MOPB
         (270 letters)

Database: data/swissprot
           82,258 sequences; 29,652,561 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING PROTEI...   467  e-131
gi|585504|sp|Q08385|MOPA_RHOCA MOLYBDENUM-PTERIN BINDING PROTEI...   207  2e-53
gi|585492|sp|P37733|MODA_AZOVI MOLYBDENUM TRANSPORT PROTEIN MODA     145  9e-35
gi|1709070|sp|P46930|MODE_ECOLI MOLYBDENUM TRANSPORT PROTEIN MODE     87  5e-17
gi|1709071|sp|P45324|MODE_HAEIN MOLYBDENUM TRANSPORT PROTEIN MO...    54  2e-07
gi|585502|sp|P04952|MOP1_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN I    53  6e-07
gi|127241|sp|P08854|MOP2_CLOPA MOLYBDENUM-PTERIN BINDING PROTEI...    52  1e-06
gi|585503|sp|P38366|MOP3_CLOPA MOLYBDENUM-PTERIN BINDING PROTEI...    51  3e-06
gi|1170996|sp|P45183|MOP_HAEIN PROBABLE MOLYBDENUM-PTERIN BINDI...    46  5e-05
gi|1709069|sp|P09833|MODC_ECOLI MOLYBDENUM TRANSPORT ATP-BINDIN...    38  0.021
gi|585500|sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING...    33  0.53
gi|2507168|sp|P08838|PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN PHOS...    30  4.6
gi|729786|sp|Q05355|HYDL_STRHA PUTATIVE POLYKETIDE HYDROXYLASE        29  7.9

>gi|585505|sp|Q08386|MOPB_RHOCA MOLYBDENUM-PTERIN BINDING PROTEIN
           MOPB
           Length = 270
           
 Score =  467 bits (1189), Expect = e-131
 Identities = 247/270 (91%), Positives = 247/270 (91%)

Query: 1   MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD 60
           MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD
Sbjct: 1   MAATKQGGGDDGRCARGVVLERTGARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWD 60

Query: 61  GVQAMNNXXXXXXXXXXXXXXXXXXXXXXXAGEKLIAAYGAIEAGVAKLLSSFEKSLNLD 120
           GVQAMNN                       AGEKLIAAYGAIEAGVAKLLSSFEKSLNLD
Sbjct: 61  GVQAMNNLLAAPVVTAAPGGKAGGGAVLTPAGEKLIAAYGAIEAGVAKLLSSFEKSLNLD 120

Query: 121 PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180
           PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP
Sbjct: 121 PAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180

Query: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI 240
           GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI
Sbjct: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATI 240

Query: 241 TRDSAEMLDLHPGVETTALIKSSHVILALP 270
           TRDSAEMLDLHPGVETTALIKSSHVILALP
Sbjct: 241 TRDSAEMLDLHPGVETTALIKSSHVILALP 270


>gi|585504|sp|Q08385|MOPA_RHOCA MOLYBDENUM-PTERIN BINDING PROTEIN
           MOPA
           Length = 265
           
 Score =  207 bits (521), Expect = 2e-53
 Identities = 123/259 (47%), Positives = 155/259 (59%), Gaps = 13/259 (5%)

Query: 20  LERTGA-RMGAERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXX 78
           L+R GA R+G +R+ LL AI R G+I+ AAREVGLSYK AWD V  +NN           
Sbjct: 12  LQRAGAPRVGGDRIRLLEAIARHGTIAGAAREVGLSYKTAWDAVGTLNNLFEQPLVEAAP 71

Query: 79  XXXXXXXXXXXXAGEKLIAAYGAIEAGVAKLL-------SSFEKSLNLDPAEVLRGLSLR 131
                       AG+ LIA +G +E  + K L       S+ EK+LN      L  L++R
Sbjct: 72  GGRTGGNARVTEAGQALIAGFGLLEGALTKALGVLEGGVSAPEKALN-----TLWSLTMR 126

Query: 132 TSARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSN 191
           TS RN   C V  V    V A+V + L +G  LTAVIT RSA EM LAPG EV AL+K++
Sbjct: 127 TSNRNTLRCTVTRVTLGAVNAEVELALTDGHSLTAVITERSATEMGLAPGVEVFALIKAS 186

Query: 192 FVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLH 251
           FV+LA  G P R+S  NR+ G V  R D P+++E+ LDLG  K+ITA IT  SA+ L L 
Sbjct: 187 FVMLAAGGDPGRISACNRLTGIVAARTDGPVNTEIILDLGNCKSITAVITHTSADALGLA 246

Query: 252 PGVETTALIKSSHVILALP 270
           PGV  TAL K+SHVILA+P
Sbjct: 247 PGVPATALFKASHVILAMP 265


>gi|585492|sp|P37733|MODA_AZOVI MOLYBDENUM TRANSPORT PROTEIN MODA
           Length = 270
           
 Score =  145 bits (362), Expect = 9e-35
 Identities = 93/253 (36%), Positives = 132/253 (51%), Gaps = 8/253 (3%)

Query: 24  GARMGAERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXX 83
           G  +   R+ LL AI R GSI+ AA+ V LSYKAAWD +  MNN                
Sbjct: 17  GTALSDTRIRLLEAIEREGSINRAAKVVPLSYKAAWDAIDTMNNLAPEPLVVRVAGGRQG 76

Query: 84  XXXXXXXAGEKLIAAYGAIEAGVAKLLSSFEKSLNLDPA-------EVLRGLSLRTSARN 136
                   G +++A Y A+E      L    + LN            ++  +S++TSARN
Sbjct: 77  GGTQLTDYGRRIVAMYRALEIEYQSALDRLSERLNEVTGGDIQAFQRLMHSMSMKTSARN 136

Query: 137 AWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLA 196
            +A  V  +    V  +VR+RL    ++ AVIT  SA  + LA G EV ALVKS+ V+L 
Sbjct: 137 QFAGIVTGLRVGGVDYEVRIRLDAENEIAAVITKASAENLELAIGKEVFALVKSSSVMLT 196

Query: 197 GAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVET 256
                 +L+ RN++ G VI+  + P+++EVTL L  G+++T  +T DS + L L PGV  
Sbjct: 197 -TEPSLKLTARNQLWGEVIDIHEGPVNNEVTLALPSGRSVTCVVTADSCKALGLAPGVAA 255

Query: 257 TALIKSSHVILAL 269
            A  KSS VILA+
Sbjct: 256 CAFFKSSSVILAV 268


 Score = 42.6 bits (98), Expect = 8e-04
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 101 AIEAGVAKLLSSFEKSLNLDPAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGE 160
           AI   V  L+ S    L  +P       SL+ +ARN    +V  +    V  +V + L  
Sbjct: 179 AIGKEVFALVKSSSVMLTTEP-------SLKLTARNQLWGEVIDIHEGPVNNEVTLALPS 231

Query: 161 GQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAG 199
           G+ +T V+TA S   + LAPG    A  KS+ V+LA  G
Sbjct: 232 GRSVTCVVTADSCKALGLAPGVAACAFFKSSSVILAVYG 270


>gi|1709070|sp|P46930|MODE_ECOLI MOLYBDENUM TRANSPORT PROTEIN MODE
           Length = 262
           
 Score = 86.6 bits (211), Expect = 5e-17
 Identities = 76/247 (30%), Positives = 114/247 (45%), Gaps = 17/247 (6%)

Query: 31  RVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXXXXXXXXX 90
           R++LL  I  +GSIS  A++ G+SYK+AWD +  MN                        
Sbjct: 21  RISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTR 80

Query: 91  AGEKLIAAY---GAIEAGVAKLLSSFEK-SLNLDPAEVLRGLSLRTSARNAWACKVWSVA 146
            G++LI  Y     I+     +LS  +   LN   A + R  SL+TSARN W   + +  
Sbjct: 81  YGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISR-FSLQTSARNQWFGTITARD 139

Query: 147 ADDVAAQVRMRLGEGQD-LTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAGVPERLS 205
            DDV   V + L +G+  L   ITA+S A + L  G EVL L+K+ +V     G+ +  +
Sbjct: 140 HDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWV-----GITQDEA 194

Query: 206 VR----NRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIK 261
           V     N++ G +          EV + L  G+T+ AT+  +  E   L  G   TA   
Sbjct: 195 VAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVN--EATSLQQGQNVTAYFN 252

Query: 262 SSHVILA 268
           +  VI+A
Sbjct: 253 ADSVIIA 259


>gi|1709071|sp|P45324|MODE_HAEIN MOLYBDENUM TRANSPORT PROTEIN MODE
           HOMOLOG
           Length = 255
           
 Score = 54.3 bits (128), Expect = 2e-07
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 3/170 (1%)

Query: 30  ERVALLAAIGRTGSISAAAREVGLSYKAAWDGVQAMNNXXXXXXXXXXXXXXXXXXXXXX 89
           +RV LL  I + GSI+ AA+   +SYK+AWD ++AMN                       
Sbjct: 21  KRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTALT 80

Query: 90  XAGEKLIAAYGAIEAGVAKLLSSF-EKSLNLDP-AEVLRGLSLRTSARNAWACKVWSVAA 147
              E+L+  Y  +E           ++S+ LD         SL++SARN +  +V     
Sbjct: 81  TYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRI 140

Query: 148 DDVAAQVRMRL-GEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLA 196
            D    V + + G    L   IT +S+A ++L    EV+ + K+ +V ++
Sbjct: 141 IDSRCVVDVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKIS 190


>gi|585502|sp|P04952|MOP1_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN I
           Length = 68
           
 Score = 53.1 bits (125), Expect = 6e-07
 Identities = 25/64 (39%), Positives = 43/64 (67%)

Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
           +S RN+++G+V+      +++EV L++ GG  IT+ I+ DS E L +  G E TA+IKS+
Sbjct: 3   ISARNQLKGKVVGLKKGVITAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVIKST 62

Query: 264 HVIL 267
            V++
Sbjct: 63  DVMI 66


 Score = 37.1 bits (84), Expect = 0.036
 Identities = 19/63 (30%), Positives = 36/63 (56%)

Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
           SARN    KV  +    + A+V + +  G  +T++I+  S  E+ +  G+E+ A++KS  
Sbjct: 4   SARNQLKGKVVGLKKGVITAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVIKSTD 63

Query: 193 VLL 195
           V++
Sbjct: 64  VMI 66


>gi|127241|sp|P08854|MOP2_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN II
           Length = 68
           
 Score = 52.3 bits (123), Expect = 1e-06
 Identities = 24/64 (37%), Positives = 43/64 (66%)

Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
           +S RN+++G+V+      +++EV L++ GG  IT+ I+ DS E L +  G E TA++KS+
Sbjct: 3   ISARNQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVVKST 62

Query: 264 HVIL 267
            V++
Sbjct: 63  DVMI 66


 Score = 37.9 bits (86), Expect = 0.021
 Identities = 21/63 (33%), Positives = 36/63 (56%)

Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
           SARN    KV  +    V A+V + +  G  +T++I+  S  E+ +  G+E+ A+VKS  
Sbjct: 4   SARNQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLDSVEELGVKEGAELTAVVKSTD 63

Query: 193 VLL 195
           V++
Sbjct: 64  VMI 66


>gi|585503|sp|P38366|MOP3_CLOPA MOLYBDENUM-PTERIN BINDING PROTEIN
           III
           Length = 68
           
 Score = 50.8 bits (119), Expect = 3e-06
 Identities = 24/64 (37%), Positives = 43/64 (66%)

Query: 204 LSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKSS 263
           +S RN+++G+V+      +++EV L++ GG  +T+ I+ DS E L +  G E TA+IKS+
Sbjct: 3   ISARNQLKGKVVAVKKGLVTAEVVLEIAGGDKVTSIISLDSIEDLGVKEGTELTAVIKST 62

Query: 264 HVIL 267
            V++
Sbjct: 63  DVMI 66


 Score = 36.7 bits (83), Expect = 0.047
 Identities = 20/63 (31%), Positives = 37/63 (57%)

Query: 133 SARNAWACKVWSVAADDVAAQVRMRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNF 192
           SARN    KV +V    V A+V + +  G  +T++I+  S  ++ +  G+E+ A++KS  
Sbjct: 4   SARNQLKGKVVAVKKGLVTAEVVLEIAGGDKVTSIISLDSIEDLGVKEGTELTAVIKSTD 63

Query: 193 VLL 195
           V++
Sbjct: 64  VMI 66


>gi|1170996|sp|P45183|MOP_HAEIN PROBABLE MOLYBDENUM-PTERIN BINDING
           PROTEIN
           Length = 69
           
 Score = 46.5 bits (108), Expect = 5e-05
 Identities = 19/67 (28%), Positives = 46/67 (68%)

Query: 203 RLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALIKS 262
           ++S RN+++G+V+   +  +++ V +D+GGG  +++T++  + + L+L  G E  A+IK+
Sbjct: 2   KISARNQLKGKVVSIENGSVNAIVHIDIGGGNVLSSTVSLAAVKELNLEVGKEAYAIIKA 61

Query: 263 SHVILAL 269
           + V++ +
Sbjct: 62  TSVMVGV 68


>gi|1709069|sp|P09833|MODC_ECOLI MOLYBDENUM TRANSPORT ATP-BINDING
           PROTEIN MODC
           Length = 352
           
 Score = 37.9 bits (86), Expect = 0.021
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 201 PERLSVRNRVRGRVIERIDAPLSSEVTLDLGGGKTITATITRDSAEMLDLHPGVETTALI 260
           P++ S+RN +R +V+   D     EV L++ GGKT+ A I+  + + L + PG+   A I
Sbjct: 287 PQQTSIRNVLRAKVVNSYDDNGQVEVELEV-GGKTLWARISPWARDELAIKPGLWLYAQI 345

Query: 261 KS 262
           KS
Sbjct: 346 KS 347


>gi|585500|sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING
           PROTEIN MODD
           Length = 380
           
 Score = 33.2 bits (74), Expect = 0.53
 Identities = 41/143 (28%), Positives = 62/143 (42%), Gaps = 12/143 (8%)

Query: 123 EVLRGLSLRTSARNAWACKVWSVAA--DDVAAQVRMRLGEGQDLTAVITARSAAEMRLAP 180
           +++  L L T+        + SV A  DD     R+    G    AV+ AR       AP
Sbjct: 242 DIMARLDLPTAFHEDAGVVIESVVAEHDDHYHLTRLAFPGG----AVLVARRPE----AP 293

Query: 181 GSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVIERIDAPLSSEVTLDLGG-GKTITAT 239
           G  +   V +  V LA + + E  S+ N +   V E ++A   + V + L   G  + A 
Sbjct: 294 GQRLRLRVHARDVSLANSRI-EDSSITNVLPATVREVVEADTPAHVLVRLEAEGTPLIAR 352

Query: 240 ITRDSAEMLDLHPGVETTALIKS 262
           ITR S + L + PG    A IK+
Sbjct: 353 ITRRSCDQLGIAPGRRMWAQIKA 375


>gi|2507168|sp|P08838|PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN
           PHOSPHOTRANSFERASE (PHOSPHOTRANSFERASE SYSTEM, ENZYME I)
           Length = 570
           
 Score = 30.1 bits (66), Expect = 4.6
 Identities = 32/141 (22%), Positives = 61/141 (42%), Gaps = 6/141 (4%)

Query: 97  AAYGAIEAGVAKLLSSFEKSLNLDP-AEVLRGLSLRTSARNAWACKVWSVAADDVAAQVR 155
           AA G I+ GV  ++      + +DP AE ++    + +A  A   + W+   ++      
Sbjct: 207 AATGTIQNGVTVIVDGINGDVIIDPSAETVKEYEEKHNAYLAQKAE-WAKLVNEPTVS-- 263

Query: 156 MRLGEGQDLTAVITARSAAEMRLAPGSEVLALVKSNFVLLAGAGVPERLSVRNRVRGRVI 215
            + G   +L A I      +  L  G E + L ++ F+ +    +P      +  +  V+
Sbjct: 264 -KDGHHVELAANIGTPDDVKGVLENGGEAVGLYRTEFLYMGRDQLPTEDEQFDAYK-TVL 321

Query: 216 ERIDAPLSSEVTLDLGGGKTI 236
           ER++       TLD+GG K +
Sbjct: 322 ERMEGKSVVVRTLDIGGDKEL 342


>gi|729786|sp|Q05355|HYDL_STRHA PUTATIVE POLYKETIDE HYDROXYLASE
           Length = 555
           
 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/62 (33%), Positives = 29/62 (45%)

Query: 101 AIEAGVAKLLSSFEKSLNLDPAEVLRGLSLRTSARNAWACKVWSVAADDVAAQVRMRLGE 160
           A+E G     S+  +S   DPA V   +  R S  +      + VAAD   + VR +LG 
Sbjct: 136 AVELGGEIRFSTELQSFEQDPAGVTAVIKSRRSGEHTTVRADYLVAADGPRSPVREQLGI 195

Query: 161 GQ 162
           GQ
Sbjct: 196 GQ 197


  Database: data/swissprot
    Posted date:  Feb 2, 2000  9:39 AM
  Number of letters in database: 29,652,561
  Number of sequences in database:  82,258
  
Lambda     K      H
   0.316    0.131    0.361 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12068104
Number of Sequences: 82258
Number of extensions: 396723
Number of successful extensions: 1066
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 18
length of query: 270
length of database: 29,652,561
effective HSP length: 56
effective length of query: 214
effective length of database: 25,046,113
effective search space: 5359868182
effective search space used: 5359868182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
